wondering how paye differs from income tax in kenya

How to Tell PAYE and Income Tax Apart in Kenya (2025)

Wondering how PAYE differs from Income Tax in Kenya? This 2025 guide breaks down the differences, who pays what, and how employees and business owners are taxed under the law.


💡 Quick Answer:

  • PAYE = a method used to collect Income Tax from employees
  • Income Tax = a broader tax on any income, whether from salary, business, rent, or investments

Let’s break it down.


🧾 What Is PAYE?

PAYE (Pay As You Earn) is a monthly tax deduction made by employers from an employee’s salary and remitted directly to the Kenya Revenue Authority (KRA).

  • Governed by the Income Tax Act – Section 37
  • Applies to all employment income above the tax-free threshold
  • Includes salaries, wages, bonuses, commissions, allowances

Employers act as withholding agents and must remit PAYE by the 9th of every month


📘 What Is Income Tax?

Income Tax is a broad tax charged on any income earned by individuals or entities in Kenya — not just salaries.

It includes:

  • Business income
  • Rental income
  • Capital gains
  • Farming income
  • Investment income (e.g. dividends, interest)
  • Salaries (via PAYE)

Income Tax is declared through:

  • Monthly filings (for some categories)
  • Annual self-assessment returns via iTax by 30th June each year

⚖️ Key Differences Between PAYE and Income Tax

FeaturePAYEIncome Tax
Who Pays?EmployeesAnyone earning income (individuals or businesses)
Collected ByEmployer (via deduction)Self (sole trader, SME, landlord, etc.)
Payment FrequencyMonthly (by 9th)Monthly (for some), plus annual return by 30 June
Tax FormEmployer: P9 / P10, Employee: auto-filedIndividual files via iTax (IT1, IT2, etc.)
Applicable LawIncome Tax Act – Sec. 37Income Tax Act – multiple sections
Common Rates (2025)Graduated up to 35%Graduated (individuals) or 30% (companies)

🧠 Example Scenarios

✅ Scenario 1: Employee

Grace works at a logistics firm and earns Ksh 80,000 per month. Her employer deducts PAYE before paying her.

She does not need to file Income Tax manually if PAYE is fully settled — unless she has other income.

✅ Scenario 2: Business Owner

James runs a small cyber café and earns Ksh 1.5M annually.

He must register for Income Tax or Turnover Tax (TOT), file returns, and pay tax himself.

✅ Scenario 3: Mixed Income

Carol has a full-time job and earns rental income.

She must file an annual Income Tax return, declaring both employment and rental income.


📅 Filing Deadlines in Kenya (2025)

Return TypeDeadline
PAYE Monthly Return9th of the following month
Individual Income Tax Return30th June (for previous calendar year)
Business/Corporate Tax6 months after year-end

⚠️ What If You Ignore Either?

  • PAYE non-compliance → employer faces Ksh 10,000/month or 25% of tax due, whichever is higher
  • Income Tax non-filing → individuals are fined Ksh 2,000, companies Ksh 20,000
  • Late payment → 5% penalty + 1% interest per month

💬 Frequently Asked Questions

Q: If I’m employed, do I need to file Income Tax?
Not if PAYE is fully paid — unless you have additional income like rent or side business.

Q: What happens if my employer doesn’t deduct PAYE?
You remain liable. KRA may pursue both you and your employer.

Q: I switched from employment to business — what should I do?
Amend your tax obligation on iTax to “Income Tax – Resident Individual” and begin self-filing.


📣 Call to Action

Don’t confuse how you earn with how you’re taxed.
💼 If you’re employed — PAYE handles your tax monthly
🚀 If you run a business or earn other income — Income Tax is your responsibility
💬 Need help? Ushuru.com can guide you through setup, filing, and compliance.

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