missed your kra return or payment deadline

KRA Tax Penalties Explained – What Happens If You File or Pay Late in 2025?

Missed your KRA return or payment deadline? Learn the official 2025 tax penalties in Kenya for VAT, PAYE, Turnover Tax, Nil returns, and more — including interest, legal backing, and tips to avoid fines.


⚖️ Where Do Tax Penalties Come From?

All tax penalties in Kenya are backed by the Tax Procedures Act (Cap. 469B) — and regularly updated by the Finance Act. These penalties apply to both individuals and businesses who:

  • File returns late
  • Fail to pay tax on time
  • Understate income
  • Fail to register for tax obligations
  • Ignore KRA correspondence

📌 The penalties apply regardless of whether the return is a nil or tax-paying return.


🚨 Common KRA Penalties in 2025

Tax TypeFiling PenaltyPayment PenaltyLaw Reference
VATKsh 10,000/month or 5% of tax due (whichever is higher)5% of tax due + 1% interest/monthTPA Sec. 83–89
Income Tax (Resident)Ksh 2,000/month (individuals) or Ksh 20,000 (companies)5% of tax due + 1% monthly interestTPA Sec. 83
Turnover Tax (TOT)Ksh 1,000/month (individuals) or Ksh 5,000 (companies)5% of tax due + 1% per monthIncome Tax Act Sec. 12C + TPA Sec. 83
PAYEKsh 10,000/month or 25% of tax due5% of tax due + 1% per monthTPA Sec. 83 + 85
Nil Returns (All types)Same penalty as above for failing to fileNot applicableTPA Sec. 83(2)

🔍 Even Nil Returns attract the full filing penalty if not submitted on time.


🧮 How Is the Penalty Calculated?

Filing Penalty:

You’ll be charged per return, per month of delay.
E.g. If you file 3 months late → 3 × Ksh 10,000 = Ksh 30,000

Payment Penalty:

  • 5% of tax due (one-time)
  • Plus 1% interest on the outstanding amount every month (compounding)

📘 Example:

Let’s say your business had a VAT liability of Ksh 50,000 in April but filed and paid in June:

Penalty TypeCalculationAmount
FilingKsh 10,000 × 2 monthsKsh 20,000
Payment5% × 50,000 = 2,500
  • 1% × 50,000 × 2 months = 1,000 | Ksh 3,500
    | Total | | Ksh 23,500

🛡️ How to Avoid or Reduce Penalties

  1. File on time — even if you owe nothing
  2. Register for relevant tax obligations (VAT, PAYE, TOT) if eligible
  3. Pay using the correct PRN on iTax before the 20th for past errors or omissions
  4. Deregister for VAT or PAYE if your business is inactive or below the threshold


💬 FAQs

Q: I filed a nil VAT return late. Do I still pay Ksh 10,000?
✅ Yes. The penalty is based on non-filing, not the tax amount.

Q: Can KRA waive penalties?
✅ Only under Voluntary Disclosure or KRA’s remission framework (upon request and in specific hardship cases).

Q: How do I know if I’ve been penalized?
Check your iTax account for demand notices, penalty assessments, or balance due under each tax obligation.


📣 Call to Action

Don’t let tax penalties catch you off guard!
💼 Whether you owe tax or not — you must file your returns on time.
💬 Need help with compliance or past penalties? Ushuru.com can help you clean up and stay compliant.

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